rec_to_nwb.processing.validation.preprocessing_validator

Module Contents

Classes

PreprocessingValidator(data_path, epochs, data_types_for_scanning)

Class to validate if preprocessing data is complete

class PreprocessingValidator(data_path, epochs, data_types_for_scanning)

Bases: rec_to_nwb.processing.validation.validator.Validator

Class to validate if preprocessing data is complete

Parameters

• all_data_dirs (list of strings) – all directories contained in directory <animal name>/<preprocessing>/<date>

• epochs (list of strings) – list of all epochs

• data_types_to_check (dictionary) – types of data required

get_missing_preprocessing_data()

__check_single_epoch()

create_summary(self)

Creates ValidationSummary object with the results of validation

Returns

missing preprocessing files

Return type

PreprocessingValidationSummary

__get_missing_preprocessing_data(self)

Get list of missing preprocessing files

Returns

missing preprocessing files

Return type

List of strings

__check_single_epoch(self, epoch)

finds missing data in single epoch

Parameters

epoch (string) – name of epoch to check

Returns

missing preprocessing files from checked epoch

Return type

List of strings